DIrectadmin and cloudlinux, conflict updating mariadb and governer-mysql.

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  • p.stoilov
    Junior Member
    • Jun 2026
    • 2

    #1

    DIrectadmin and cloudlinux, conflict updating mariadb and governer-mysql.

    Hello all.
    I am running a Directadmin server with cloudlinux on Alma 10 since few months.
    I almost have no problems until now.
    My current mariadb version is:
    mysql Ver 15.1 Distrib 10.11.15-MariaDB, for linux-systemd (x86_64) using readline 5.1

    I just tried to update packages with dnf update and went into following conflict:
    Code:
    dnf update
    Last metadata expiration check: 1:21:58 ago on Wed 03 Jun 2026 01:47:28 PM CEST.
    Dependencies resolved.
    ========================================================================================================================================================================================================================
     Package                                                      Architecture                           Version                                                 Repository                                            Size
    ========================================================================================================================================================================================================================
    Installing:
     kernel                                                       x86_64                                 6.12.0-211.7.4.el10_2                                   baseos                                               1.6 M
     kernel-core                                                  x86_64                                 6.12.0-211.7.4.el10_2                                   baseos                                                19 M
     kernel-modules                                               x86_64                                 6.12.0-211.7.4.el10_2                                   baseos                                                42 M
     kernel-modules-core                                          x86_64                                 6.12.0-211.7.4.el10_2                                   baseos                                                30 M
     kernel-modules-extra                                         x86_64                                 6.12.0-211.7.4.el10_2                                   baseos                                               3.0 M
    Upgrading:
     cl-MariaDB-meta                                              x86_64                                 11.8.6-1.el10                                           cloudlinux-rollout-1                                 9.7 k
     cl-MariaDB-meta-client                                       x86_64                                 11.8.6-1.el10                                           cloudlinux-rollout-1                                 8.9 k
     cl-MariaDB-meta-devel                                        x86_64                                 11.8.6-1.el10                                           cloudlinux-rollout-1                                 8.2 k
     cl-MariaDB1011                                               x86_64                                 10.11.17-1.el10                                         cloudlinux-rollout-1                                 7.8 M
     cl-MariaDB1011-devel                                         x86_64                                 10.11.17-1.el10                                         cloudlinux-rollout-1                                 8.0 M
     cl-MariaDB1011-libs                                          x86_64                                 10.11.17-1.el10                                         cloudlinux-rollout-1                                 188 k
     cl-MariaDB1011-server                                        x86_64                                 10.11.17-1.el10                                         cloudlinux-rollout-1                                  23 M
     cloudlinux-release                                           x86_64                                 10-5.el10                                               cloudlinux-rollout-5                                  27 k
     governor-mysql                                               x86_64                                 1.2-145.el10.cloudlinux                                 cloudlinux-rollout-1                                 255 k
     kernel-headers                                               x86_64                                 6.12.0-211.7.4.el10_2                                   appstream                                            3.2 M
     kernel-modules-extra-matched                                 x86_64                                 6.12.0-211.7.4.el10_2                                   baseos                                               1.6 M
     kernel-tools                                                 x86_64                                 6.12.0-211.7.4.el10_2                                   baseos                                               2.1 M
     kernel-tools-libs                                            x86_64                                 6.12.0-211.7.4.el10_2                                   baseos                                               1.6 M
     openssl                                                      x86_64                                 1:3.5.5-3.el10_2.alma.1                                 baseos                                               1.2 M
     openssl-devel                                                x86_64                                 1:3.5.5-3.el10_2.alma.1                                 appstream                                            2.9 M
     openssl-fips-provider                                        x86_64                                 1:3.5.5-3.el10_2.alma.1                                 baseos                                               812 k
     openssl-libs                                                 x86_64                                 1:3.5.5-3.el10_2.alma.1                                 baseos                                               2.2 M
     python3-perf                                                 x86_64                                 6.12.0-211.7.4.el10_2                                   appstream                                            3.1 M
    Installing dependencies:
     cl-MariaDB1108                                               x86_64                                 11.8.6-1.el10                                           cloudlinux-rollout-1                                 9.0 M
     cl-MariaDB1108-devel                                         x86_64                                 11.8.6-1.el10                                           cloudlinux-rollout-1                                 8.5 M
     cl-MariaDB1108-libs                                          x86_64                                 11.8.6-1.el10                                           cloudlinux-rollout-1                                 199 k
     cl-MariaDB1108-server                                        x86_64                                 11.8.6-1.el10                                           cloudlinux-rollout-1                                  25 M
    Removing:
     kernel                                                       x86_64                                 6.12.0-124.55.3.el10_1                                  @baseos                                                0  
     kernel-core                                                  x86_64                                 6.12.0-124.55.3.el10_1                                  @baseos                                               69 M
     kernel-modules                                               x86_64                                 6.12.0-124.55.3.el10_1                                  @baseos                                               39 M
     kernel-modules-core                                          x86_64                                 6.12.0-124.55.3.el10_1                                  @baseos                                               27 M
     kernel-modules-extra                                         x86_64                                 6.12.0-124.55.3.el10_1                                  @baseos                                              1.4 M
    
    Transaction Summary
    ========================================================================================================================================================================================================================
    Install   9 Packages
    Upgrade  18 Packages
    Remove    5 Packages
    
    Total download size: 198 M
    Is this ok [y/N]: y
    Downloading Packages:
    (1/27): kernel-6.12.0-211.7.4.el10_2.x86_64.rpm                                                                                                                                         9.9 MB/s | 1.6 MB     00:00    
    (2/27): kernel-core-6.12.0-211.7.4.el10_2.x86_64.rpm                                                                                                                                    8.4 MB/s |  19 MB     00:02    
    (3/27): kernel-modules-extra-6.12.0-211.7.4.el10_2.x86_64.rpm                                                                                                                           9.0 MB/s | 3.0 MB     00:00    
    (4/27): kernel-modules-6.12.0-211.7.4.el10_2.x86_64.rpm                                                                                                                                 8.9 MB/s |  42 MB     00:04    
    (5/27): kernel-modules-core-6.12.0-211.7.4.el10_2.x86_64.rpm                                                                                                                            5.7 MB/s |  30 MB     00:05    
    (6/27): cl-MariaDB1108-libs-11.8.6-1.el10.x86_64.rpm                                                                                                                                     95 kB/s | 199 kB     00:02    
    (7/27): cl-MariaDB1108-11.8.6-1.el10.x86_64.rpm                                                                                                                                         478 kB/s | 9.0 MB     00:19    
    (8/27): kernel-headers-6.12.0-211.7.4.el10_2.x86_64.rpm                                                                                                                                  19 MB/s | 3.2 MB     00:00    
    (9/27): openssl-devel-3.5.5-3.el10_2.alma.1.x86_64.rpm                                                                                                                                   21 MB/s | 2.9 MB     00:00    
    (10/27): python3-perf-6.12.0-211.7.4.el10_2.x86_64.rpm                                                                                                                                   20 MB/s | 3.1 MB     00:00    
    (11/27): kernel-modules-extra-matched-6.12.0-211.7.4.el10_2.x86_64.rpm                                                                                                                   17 MB/s | 1.6 MB     00:00    
    (12/27): kernel-tools-6.12.0-211.7.4.el10_2.x86_64.rpm                                                                                                                                   24 MB/s | 2.1 MB     00:00    
    (13/27): kernel-tools-libs-6.12.0-211.7.4.el10_2.x86_64.rpm                                                                                                                              18 MB/s | 1.6 MB     00:00    
    (14/27): openssl-3.5.5-3.el10_2.alma.1.x86_64.rpm                                                                                                                                        21 MB/s | 1.2 MB     00:00    
    (15/27): openssl-fips-provider-3.5.5-3.el10_2.alma.1.x86_64.rpm                                                                                                                          16 MB/s | 812 kB     00:00    
    (16/27): openssl-libs-3.5.5-3.el10_2.alma.1.x86_64.rpm                                                                                                                                   28 MB/s | 2.2 MB     00:00    
    (17/27): cl-MariaDB-meta-11.8.6-1.el10.x86_64.rpm                                                                                                                                        11 kB/s | 9.7 kB     00:00    
    (18/27): cl-MariaDB-meta-client-11.8.6-1.el10.x86_64.rpm                                                                                                                                 11 kB/s | 8.9 kB     00:00    
    (19/27): cl-MariaDB1108-devel-11.8.6-1.el10.x86_64.rpm                                                                                                                                  422 kB/s | 8.5 MB     00:20    
    (20/27): cl-MariaDB-meta-devel-11.8.6-1.el10.x86_64.rpm                                                                                                                                 5.6 kB/s | 8.2 kB     00:01    
    (21/27): cl-MariaDB1011-10.11.17-1.el10.x86_64.rpm                                                                                                                                      307 kB/s | 7.8 MB     00:26    
    (22/27): cl-MariaDB1011-devel-10.11.17-1.el10.x86_64.rpm                                                                                                                                302 kB/s | 8.0 MB     00:27    
    (23/27): cl-MariaDB1011-libs-10.11.17-1.el10.x86_64.rpm                                                                                                                                  89 kB/s | 188 kB     00:02    
    (24/27): governor-mysql-1.2-145.el10.cloudlinux.x86_64.rpm                                                                                                                              129 kB/s | 255 kB     00:01    
    (25/27): cloudlinux-release-10-5.el10.x86_64.rpm                                                                                                                                         19 kB/s |  27 kB     00:01    
    (26/27): cl-MariaDB1108-server-11.8.6-1.el10.x86_64.rpm                                                                                                                                 441 kB/s |  25 MB     00:59    
    (27/27): cl-MariaDB1011-server-10.11.17-1.el10.x86_64.rpm                                                                                                                               669 kB/s |  23 MB     00:35    
    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
    Total                                                                                                                                                                                   2.2 MB/s | 198 MB     01:29    
    Running transaction check
    Transaction check succeeded.
    Running transaction test
    The downloaded packages were saved in cache until the next successful transaction.
    You can remove cached packages by executing 'dnf clean packages'.
    Error: Transaction test error:
      file /usr/lib64/libmariadb.so.3 conflicts between attempted installs of cl-MariaDB1011-libs-10.11.17-1.el10.x86_64 and cl-MariaDB1108-libs-11.8.6-1.el10.x86_64
      file /usr/lib64/mysql/plugin/auth_gssapi_client.so conflicts between attempted installs of cl-MariaDB1011-libs-10.11.17-1.el10.x86_64 and cl-MariaDB1108-libs-11.8.6-1.el10.x86_64
      file /usr/lib64/mysql/plugin/caching_sha2_password.so conflicts between attempted installs of cl-MariaDB1011-libs-10.11.17-1.el10.x86_64 and cl-MariaDB1108-libs-11.8.6-1.el10.x86_64
      file /usr/lib64/mysql/plugin/client_ed25519.so conflicts between attempted installs of cl-MariaDB1011-libs-10.11.17-1.el10.x86_64 and cl-MariaDB1108-libs-11.8.6-1.el10.x86_64
      file /usr/lib64/mysql/plugin/dialog.so conflicts between attempted installs of cl-MariaDB1011-libs-10.11.17-1.el10.x86_64 and cl-MariaDB1108-libs-11.8.6-1.el10.x86_64
      file /usr/lib64/mysql/plugin/mysql_clear_password.so conflicts between attempted installs of cl-MariaDB1011-libs-10.11.17-1.el10.x86_64 and cl-MariaDB1108-libs-11.8.6-1.el10.x86_64
      file /usr/lib64/mysql/plugin/sha256_password.so conflicts between attempted installs of cl-MariaDB1011-libs-10.11.17-1.el10.x86_64 and cl-MariaDB1108-libs-11.8.6-1.el10.x86_64
      file /usr/bin/mariadb conflicts between attempted installs of cl-MariaDB1011-10.11.17-1.el10.x86_64 and cl-MariaDB1108-11.8.6-1.el10.x86_64
      file /usr/bin/mariadb-access conflicts between attempted installs of cl-MariaDB1011-10.11.17-1.el10.x86_64 and cl-MariaDB1108-11.8.6-1.el10.x86_64
      file /usr/bin/mariadb-admin conflicts between attempted installs of cl-MariaDB1011-10.11.17-1.el10.x86_64 and cl-MariaDB1108-11.8.6-1.el10.x86_64
      file /usr/bin/mariadb-binlog conflicts between attempted installs of cl-MariaDB1011-10.11.17-1.el10.x86_64 and cl-MariaDB1108-11.8.6-1.el10.x86_64
      file /usr/bin/mariadb-check conflicts between attempted installs of cl-MariaDB1011-10.11.17-1.el10.x86_64 and cl-MariaDB1108-11.8.6-1.el10.x86_64
      file /usr/bin/mariadb-conv conflicts between attempted installs of cl-MariaDB1011-10.11.17-1.el10.x86_64 and cl-MariaDB1108-11.8.6-1.el10.x86_64
      file /usr/bin/mariadb-convert-table-format conflicts between attempted installs of cl-MariaDB1011-10.11.17-1.el10.x86_64 and cl-MariaDB1108-11.8.6-1.el10.x86_64
      file /usr/bin/mariadb-dump conflicts between attempted installs of cl-MariaDB1011-10.11.17-1.el10.x86_64 and cl-MariaDB1108-11.8.6-1.el10.x86_64
      file /usr/bin/mariadb-dumpslow conflicts between attempted installs of cl-MariaDB1011-10.11.17-1.el10.x86_64 and cl-MariaDB1108-11.8.6-1.el10.x86_64
      file /usr/bin/mariadb-embedded conflicts between attempted installs of cl-MariaDB1011-10.11.17-1.el10.x86_64 and cl-MariaDB1108-11.8.6-1.el10.x86_64
      file /usr/bin/mariadb-find-rows conflicts between attempted installs of cl-MariaDB1011-10.11.17-1.el10.x86_64 and cl-MariaDB1108-11.8.6-1.el10.x86_64
      file /usr/bin/mariadb-hotcopy conflicts between attempted installs of cl-MariaDB1011-10.11.17-1.el10.x86_64 and cl-MariaDB1108-11.8.6-1.el10.x86_64
      file /usr/bin/mariadb-import conflicts between attempted installs of cl-MariaDB1011-10.11.17-1.el10.x86_64 and cl-MariaDB1108-11.8.6-1.el10.x86_64
      file /usr/bin/mariadb-plugin conflicts between attempted installs of cl-MariaDB1011-10.11.17-1.el10.x86_64 and cl-MariaDB1108-11.8.6-1.el10.x86_64
    ... and many more


    my dbgoverner version:
    dbctl --version
    version 1.2-143

    my os info:
    Code:
    NAME="AlmaLinux"
    VERSION="10.2 (Lavender Lion)"
    RELEASE_TYPE=stable
    ID="almalinux"
    ID_LIKE="rhel centos fedora"
    VERSION_ID="10.2"
    PLATFORM_ID="platform:el10"
    PRETTY_NAME="AlmaLinux 10.2 (Lavender Lion)"
    my kernel:
    6.12.0-211.7.3.el10_2.x86_64

    CloudLinux OS Shared
    DirectAdmin,1.703

    May be this is related to Cloudlinux OS update to 10.2, but how can I figure it out?
  • bogdan.sh
    Administrator
    • Nov 2016
    • 1315

    #2
    Hi,

    Thanks for reporting. The governor-mysql-1.2-146 package, containing the fix for CLOS-4544, has been released to the testing repository. It is available for update using the following command:
    Code:
    yum update governor-mysql --enablerepo=cloudlinux-updates-testing
    Please try to update and let us know if you encounter any problems

    Comment

    • p.stoilov
      Junior Member
      • Jun 2026
      • 2

      #3
      I did a VM reboot in order to snapshot it before making any changes.
      After reboot, conflicting packages were not available for update anymore, so I did a regular package update.

      Comment

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